Summary

The static runner now retains TM1 findings from fenced commands in canonical SKILL.md. It keeps existing code-example filtering for ordinary Markdown, including non-canonical *skill.md filenames, and leaves the unchanged analyzer-local fenced-example bypasses disclosed as residual scope.

Root cause

run_static_patterns() treated SKILL.md as non-executable Markdown, then dropped findings whose context contained triple backticks. The TM1 analyzer emitted the finding, but the runner removed it before reporting.

Changes

• Kept the existing loose _is_skill_md(path) helper at the three legacy SKILL.md doc-filter exemption sites, and added _is_canonical_skill_md(path) for the new exact-basename runner exemption.
• Skipped the generic code-example hard-drop and downweight branch only for files literally named SKILL.md.
• Added runner coverage for fenced SKILL.md, fenced guide.md, non-canonical *skill.md paths that must stay filtered, and the loose-vs-canonical path-helper boundary.
• Added a no-LLM CLI regression that writes the issue-shaped fixture to tmp_path / "SKILL.md" and asserts TM1 plus nonzero before/after filtering counts.

Scope

This implements only the fenced SKILL.md example-filtering slice of issue #268. It doesn't change meta_analyzer.py, scoring bands, report schema, analyzer registration, provider code, or other issue slices. The retained finding remains in the current LOW/SAFE aggregate band; this change surfaces and counts it without retuning scoring. Analyzer-local fenced-example bypasses still remain for TM4, EA2, E5, AR, and MP because those modules filter upstream of the runner.

Verification

• pytest tests/nodes/analyzers/test_static_runner_filtering.py tests/unit/test_cli.py -v, 58 passed
• pytest tests/unit/test_cli.py::test_cli_scan_no_llm_reports_fenced_skill_md_tool_misuse -q, 1 passed
• pytest -m "not integration and not provider" tests/ -q, 1321 passed, 12 skipped, 34 deselected, 6 xfailed
• uv run ruff check src/ tests/
• uv run ruff format --check src/ tests/
• git diff --check

Base reproduction: issues: [], findings_before_filtering: 0, and findings_after_filtering: 0.
Head reproduction: the CLI regression asserts TM1 in issues and both filtering counts greater than zero.

Upstream

Refs #268